- #MATLAB 2018B RUN A SCRIPT HOW TO#
- #MATLAB 2018B RUN A SCRIPT INSTALL#
- #MATLAB 2018B RUN A SCRIPT GENERATOR#
- #MATLAB 2018B RUN A SCRIPT FULL#
- #MATLAB 2018B RUN A SCRIPT LICENSE#
#MATLAB 2018B RUN A SCRIPT FULL#
Start Matlab normally (with the full user interface). I would like to add breakpoints and do step-by-step debugging in Matlab. MATLAB/./bin/matlab.exe as Matlab executable (and not. Problem: module execution is not completed. 
Please disable firewal or add a firewall exception.
Solution : Firewall settings prevent Matlab-Slicer communication. Enter the following command: netsh firewall add portopening tcp 4100 MatlabBridge. Click Yes, if a dialog box appears asking " Do you want to allow the following program to make changes to this computer?". Start cmd.exe as administrator (open the Windows Start menu, type "cmd", hit Ctrl + Shift + Enter). Please add a firewall exception by the following steps: Problem: When I try to run my Matlab module, the Matlab process starts (Matlab window appears on the taskbar and it displays the message "Starting OpenIGTLink command server at port 4100 Waiting for client connections."), but the Matlab module execution fails (in the Slicer error log the "igtl::ClientSocket (.): Failed to connect to server 127.0.0.1:4100" message is displayed). #MATLAB 2018B RUN A SCRIPT GENERATOR#
Solution : Please go to the Matlab module generator module and in the “Matlab executable” editbox set the path to your “/Applications/MATLAB.app/bin/matlab” (instead of MATLAB.app you may have MATLAB_.app, where is the MATLAB Release's version, i.e., R2009a, R2012b, etc.). Solution : Please go to the Matlab module generator module and in the “Matlab executable” editbox set the path to your “./bin/matlab.exe” (not to "activate_matlab.exe" or other exe files in the Matlab program directory or any file in the bin/win64 directory). Problem: When I try to run my Matlab module, the Matlab process does not start (Matlab window does not appear on the taskbar). Tested with Matlab R2009b, R2012a, and R2013a on Windows7. Start MyModuleCollection.exe (anytime before you start Slicer). Set the location of your Matlab module proxy (.bat file or shell script) and CLI descriptor (.xml) files as additional module paths in Slicer. Copy the MyModuleCollection.exe to the target computer (it can be anywhere, but make sure it's not in a directory that is listed in Slicer additional module paths). Installation on the target computer (a self-contained executable can be created as described on the Documentation/Labs/CustomSlicerGenerator page):. choose cli_commandserver.m as "Main File". m file that the slicer module generator creates) as Shared Resources 
include all the MatlabBridge CommandServer functions ( ) as Shared Resources. On the development computer (with Matlab and Matlab Compiler license) create an executable (let's call it MyModuleCollection.exe) with the Matlab Compiler:. #MATLAB 2018B RUN A SCRIPT LICENSE#
Running Matlab modules without accessing a Matlab license: You can run your Matlab modules on a computer that does not have Matlab license by using the Matlab Compiler.Issue tracker: open issues and enhancement requests.Demo video: Editing and debugging a Matlab module.Demo video: Creating and using a Matlab module.Specification of module descriptor XML file.
#MATLAB 2018B RUN A SCRIPT HOW TO#
Comprehensive MatlabBridge tutorial: how to create, run, customize Matlab modules.The Matlab Commander allows running any commands from the user interface or from another Slicer module. Matlab Commander (in the module list: Developer Tools / Matlab).Matlab Module Generator (in the module list: Developer Tools / Matlab).Tutorial: How to create, run, customize Matlab modules
The Matlab module behaves exactly as any other command-line-interface module, the Matlab engine is started automatically in the background (and it is kept running in the background so that you don’t have to wait for Matlab startup each time you run your function)
#MATLAB 2018B RUN A SCRIPT INSTALL#
are needed – the only requirements are to download and install 3D Slicer with the MatlabBridge extension and have Matlab on your computer
No building of 3D Slicer or MEX files, etc. You can get started quickly by generating a skeleton Matlab function and interface definition XML file using the Matlab Module Generator module. The graphical user interface is generated automatically from a standard command-line interface definition XML file (no GUI programming needed). If you change your Matlab function then you can re-run the function and see the updated results with a single click. If you change any input on the GUI (and the “AutoRun” option is enabled) the bridge automatically re-runs the Matlab script with the updated parameters and shows the new results. The extension allows running of Matlab functions directly from 3D Slicer: it takes the input from the data loaded into Slicer and visualizes the results in Slicer right after the execution is completed. MatlabBridge is an extension of 3D Slicer to allow running Matlab functions directly in 3D Slicer.
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